제품특징
Drag and drop to import and
convert sequence data
Share your data. Import, export and convert common file types as well as their annotations and notes.
Organize, search and share sequence databases
원하는 방식으로 데이터 라이브러리를 정렬하고 탐색합니다.
- 시퀀스 데이터베이스 추가 및 제거
- 자동으로 저장된 문서 기록
- 일괄 내보내기
- 일괄 이름 변경
- 필드를 기준으로 문서 필터링
- 주석이 달린 시퀀스 파일 공유
- Genbank로 내보내기 및 제출
Wide ranging file format compatibility from FASTA to VectorNTI
어디에서나 많은 데이터를 얻을 수 있나요?
Geneious에서는 간단히 drag & drop을 통해 다양한 데이터를 가지고 올 수 있습니다.
Smart NGS File Importing
| Format | Extensions | Data Types | Common Sources |
|---|---|---|---|
| BED | *.bed | Annotations | UCSC |
| Common Assembly Format | *.caf | Contigs | Sequencher |
| Clone Manager | *.cm5 | Nucleotide sequences | Clone Manager |
| Clustal | *.aln | Alignments | ClustalX |
| CS FASTA | *.csfasta | Color space | FASTA ABI SOLiD |
| DNAStar | *.seq, *.pro | Nucleotide & protein sequences | DNAStar |
| DNA Strider | *.str | Sequences | DNA Strider |
| Embl/UniProt | *.embl, *.swp | Sequences | Embl, UniProt |
| Endnote (8.0) XML | *.xml | Journal article references | Endnote, Journal article websites |
| FASTA | *.fasta, *.fas, etc. | Sequences, alignments | PAUP*, ClustalX, BLAST, FASTA |
| FASTQ | *.fastq, *.fasq | Sequences with quality | Solexa/Illumina |
| GCG | *.seq | Sequences | GCG, |
| GenBank | *.gb, *.xml | Nucleotide & protein sequences | GenBank |
| Geneious | *.xml, *.geneious | Preferences, databases | Geneious |
| GFF | *.gff | Annotations | Sanger Artemis |
| MEGA | *.meg | Alignments | MEGA |
| Molecular structure | *.pdb, *.mol, *.xyz, *.cml, *.gpr, *.hin, *.nwo | 3D molecular structures | 3D structure databases and programs |
| Newick | *.tre, *.tree, etc. | Phylogenetic trees | PHYLIP, Tree-Puzzle, PAUP*, ClustalX |
| Nexus | *.nxs, *.nex | Trees, Alignments | PAUP*, Mesquite, MrBayes & MacClade |
| PDB | *.pdb | 3D Protein structures | SP3, SP2, SPARKS, Protein Data Bank |
| Documents, presentations | Adobe Writer, LATEX, Miktex | ||
| Phrap ACE | *.ace | Contig assemblies | Phrap/Consed |
| PileUp | *.msf | Alignments pileup | (gcg) |
| PIR/NBRF | *.pir | Sequences, alignments | NBRF PIR |
| Qual | *.qual | Quality file | Associated with a FASTA file |
| Raw sequence text | *.seq | Sequences | Any file that contains only a sequence, |
| Rich Sequence Format | *.rsf | Sequences, alignments | GCGs NetFetch |
| Comma/Tab Separated Values | *.csv, *.tsv | Spreadsheet files | Microsoft Excel |
| SAM/BAM | *.sam, *.bam | Contigs | SAMtools |
| Sequence Chromatograms | *.ab1, *.scf | Raw sequencing trace & sequence | Sequencing machines |
| SnapGene | *.dna | Sequences, annotations, metadata | SnapGene |
| Variant Call Format | *.vcf | Variant calls/SNPs | Variant callers and databases |
| Vector NTI sequence | *.gb, *.gp | Nucleotide & protein sequences | Vector NTI |
| Vector NTI/AlignX alignment | *.apr | Alignments | Vector NTI, AlignX |
| Vector NTI Archive | *.ma4, *.pa4, *.oa4, *.ea4, *.ca6 | Nucleotide & protein sequences, enzyme sets and publications | Vector NTI |
| Vector NTI/ContigExpress | *.cep | Nucleotide sequence assemblies | Vector NTI |
| Vector NTI database | VNTI Database | Nucleotide & protein sequences, enzyme sets and publications | Vector NTI |
Export Format Options
다양한 샘플과 reference sequence가 혼합되어 있더라도 drop 기능을 통해 SAM, BAM, GFF, BED 및 VCF 파일을 가져올 수 있습니다.
| Data Type | Format |
|---|---|
| DNA sequence | FASTA, Genbank XML, Genbank flat, Geneious |
| Amino acid sequence | FASTA, Genbank XML, Genbank flat, Geneious |
| Chromatogram sequence | ABI, Geneious |
| Sequence with quality | FastQ, Qual, Geneious |
| Annotation | GFF, BED, VCF, Geneious |
| Multiple sequence alignment | Phylip, FASTA, NEXUS, MEGA3, Geneious |
| Assembly | Phrap ACE, Geneious, SAM/BAM, Geneious |
| Phylogenetic tree | Phylip, FASTA, NEXUS, Newick, MEGA3, Geneious |
| PDF document | PDF, Geneious |
| Publication | EndNote 8.0, Geneious |
| Graphs | CSV or WIG, or images |